Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC005962.1-201ENST00000584100 773 ntBASIC17.46■□□□□ 0.39
GABPAQ06546 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABPAQ06546 AC097724.1-201ENST00000609581 426 ntBASIC17.46■□□□□ 0.39
GABPAQ06546 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.46■□□□□ 0.39
GABPAQ06546 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GABPAQ06546 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
GABPAQ06546 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.46■□□□□ 0.39
GABPAQ06546 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABPAQ06546 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABPAQ06546 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.46■□□□□ 0.39
GABPAQ06546 LINC00528-201ENST00000600723 2160 ntBASIC17.46■□□□□ 0.39
GABPAQ06546 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
GABPAQ06546 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GABPAQ06546 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.46■□□□□ 0.38
GABPAQ06546 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
GABPAQ06546 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.46■□□□□ 0.38
GABPAQ06546 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.46■□□□□ 0.38
GABPAQ06546 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
GABPAQ06546 AC008132.1-202ENST00000342005 1389 ntBASIC17.45■□□□□ 0.38
GABPAQ06546 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.45■□□□□ 0.38
GABPAQ06546 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.45■□□□□ 0.38
GABPAQ06546 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.45■□□□□ 0.38
GABPAQ06546 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.45■□□□□ 0.38
GABPAQ06546 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.45■□□□□ 0.38
GABPAQ06546 AC011742.3-201ENST00000439053 820 ntBASIC17.45■□□□□ 0.38
GABPAQ06546 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.45■□□□□ 0.38
GABPAQ06546 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.45■□□□□ 0.38
GABPAQ06546 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
GABPAQ06546 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.45■□□□□ 0.38
GABPAQ06546 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.45■□□□□ 0.38
GABPAQ06546 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
GABPAQ06546 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.45■□□□□ 0.38
GABPAQ06546 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 AP001505.2-201ENST00000616815 443 ntBASIC17.45■□□□□ 0.38
GABPAQ06546 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.45■□□□□ 0.38
GABPAQ06546 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.45■□□□□ 0.38
GABPAQ06546 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.45■□□□□ 0.38
GABPAQ06546 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
GABPAQ06546 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GABPAQ06546 AC136759.1-202ENST00000530858 2194 ntBASIC17.45■□□□□ 0.38
GABPAQ06546 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GABPAQ06546 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
GABPAQ06546 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.44■□□□□ 0.38
GABPAQ06546 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GABPAQ06546 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
GABPAQ06546 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.44■□□□□ 0.38
GABPAQ06546 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GABPAQ06546 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.44■□□□□ 0.38
GABPAQ06546 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 MIR769-201ENST00000390225 118 ntBASIC17.44■□□□□ 0.38
GABPAQ06546 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.44■□□□□ 0.38
GABPAQ06546 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.44■□□□□ 0.38
GABPAQ06546 AL035414.1-201ENST00000451327 857 ntBASIC17.44■□□□□ 0.38
GABPAQ06546 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.44■□□□□ 0.38
GABPAQ06546 AC024681.1-201ENST00000521917 487 ntBASIC17.44■□□□□ 0.38
GABPAQ06546 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.44■□□□□ 0.38
GABPAQ06546 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
GABPAQ06546 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.44■□□□□ 0.38
GABPAQ06546 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.44■□□□□ 0.38
GABPAQ06546 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.44■□□□□ 0.38
GABPAQ06546 RN7SL574P-201ENST00000581512 297 ntBASIC17.44■□□□□ 0.38
GABPAQ06546 AL136295.7-201ENST00000619226 1200 ntBASIC17.44■□□□□ 0.38
GABPAQ06546 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.44■□□□□ 0.38
GABPAQ06546 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.44■□□□□ 0.38
GABPAQ06546 AL805961.1-203ENST00000641078 1258 ntBASIC17.44■□□□□ 0.38
GABPAQ06546 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GABPAQ06546 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.44■□□□□ 0.38
GABPAQ06546 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.44■□□□□ 0.38
GABPAQ06546 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
GABPAQ06546 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GABPAQ06546 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms