Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NKX6-1P78426 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NKX6-1P78426 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX6-1P78426 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NKX6-1P78426 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX6-1P78426 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-1P78426 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-1P78426 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-1P78426 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 AC026954.1-201ENST00000429771 1293 ntBASIC13.34□□□□□ -0.27
NKX6-1P78426 C2orf27AP3-201ENST00000434123 579 ntBASIC13.34□□□□□ -0.27
NKX6-1P78426 AC012441.1-201ENST00000446669 685 ntBASIC13.34□□□□□ -0.27
NKX6-1P78426 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.34□□□□□ -0.27
NKX6-1P78426 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX6-1P78426 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX6-1P78426 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX6-1P78426 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX6-1P78426 AC023310.1-201ENST00000554836 735 ntBASIC13.34□□□□□ -0.27
NKX6-1P78426 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX6-1P78426 AP001063.1-201ENST00000568332 529 ntBASIC13.34□□□□□ -0.27
NKX6-1P78426 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-1P78426 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-1P78426 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX6-1P78426 AL354718.3-201ENST00000616414 581 ntBASIC13.34□□□□□ -0.27
NKX6-1P78426 CR382287.1-201ENST00000623954 586 ntBASIC13.34□□□□□ -0.27
NKX6-1P78426 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX6-1P78426 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-1P78426 AC009090.5-201ENST00000624886 2285 ntBASIC13.34□□□□□ -0.27
NKX6-1P78426 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX6-1P78426 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX6-1P78426 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-1P78426 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NKX6-1P78426 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NKX6-1P78426 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX6-1P78426 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NKX6-1P78426 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-1P78426 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-1P78426 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-1P78426 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 RPL5P21-201ENST00000404620 815 ntBASIC13.33□□□□□ -0.28
NKX6-1P78426 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX6-1P78426 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NKX6-1P78426 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-1P78426 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX6-1P78426 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
NKX6-1P78426 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 C2orf69P2-201ENST00000562032 1123 ntBASIC13.33□□□□□ -0.28
NKX6-1P78426 DUX4L45-201ENST00000566406 1057 ntBASIC13.33□□□□□ -0.28
NKX6-1P78426 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX6-1P78426 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-1P78426 AC244669.2-201ENST00000612320 853 ntBASIC13.33□□□□□ -0.28
NKX6-1P78426 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-1P78426 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NKX6-1P78426 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.33□□□□□ -0.28
NKX6-1P78426 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
NKX6-1P78426 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
NKX6-1P78426 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX6-1P78426 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX6-1P78426 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms