Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAE1P78406 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.21□□□□□ -0.14
RAE1P78406 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAE1P78406 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAE1P78406 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAE1P78406 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAE1P78406 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAE1P78406 AC011840.2-201ENST00000563063 1520 ntBASIC14.2□□□□□ -0.14
RAE1P78406 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RAE1P78406 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 AL928921.2-201ENST00000641325 2442 ntBASIC14.2□□□□□ -0.14
RAE1P78406 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RAE1P78406 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.2□□□□□ -0.14
RAE1P78406 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.2□□□□□ -0.14
RAE1P78406 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.2□□□□□ -0.14
RAE1P78406 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.2□□□□□ -0.14
RAE1P78406 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 AC138696.2-201ENST00000607376 223 ntBASIC14.2□□□□□ -0.14
RAE1P78406 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 AC020910.5-201ENST00000623668 1865 ntBASIC14.2□□□□□ -0.14
RAE1P78406 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 AL136172.1-201ENST00000598590 1394 ntBASIC14.2□□□□□ -0.14
RAE1P78406 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.2□□□□□ -0.14
RAE1P78406 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAE1P78406 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAE1P78406 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.19□□□□□ -0.14
RAE1P78406 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAE1P78406 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAE1P78406 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAE1P78406 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAE1P78406 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.19□□□□□ -0.14
RAE1P78406 HMGN1P19-201ENST00000436976 333 ntBASIC14.19□□□□□ -0.14
RAE1P78406 AC245100.3-201ENST00000441281 285 ntBASIC14.19□□□□□ -0.14
RAE1P78406 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.19□□□□□ -0.14
RAE1P78406 AC106760.1-201ENST00000508690 800 ntBASIC14.19□□□□□ -0.14
RAE1P78406 GCOM2-201ENST00000509133 1104 ntBASIC14.19□□□□□ -0.14
RAE1P78406 AC068587.3-201ENST00000526613 355 ntBASIC14.19□□□□□ -0.14
RAE1P78406 TDH-203ENST00000531764 1110 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms