Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 AC018665.1-201ENST00000622927 1362 ntBASIC11.28□□□□□ -0.6
HIST1H2BCP62807 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HIST1H2BCP62807 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
HIST1H2BCP62807 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 UNC93B2-201ENST00000285383 730 ntBASIC11.27□□□□□ -0.61
HIST1H2BCP62807 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 AC092597.1-201ENST00000487352 616 ntBASIC11.27□□□□□ -0.61
HIST1H2BCP62807 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 FITM1-202ENST00000559294 800 ntBASIC11.27□□□□□ -0.61
HIST1H2BCP62807 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 AC139887.4-201ENST00000607877 719 ntBASIC11.27□□□□□ -0.61
HIST1H2BCP62807 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 AL583810.2-201ENST00000556430 3254 ntBASIC11.27□□□□□ -0.61
HIST1H2BCP62807 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HIST1H2BCP62807 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H2BCP62807 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms