Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.21□□□□□ -0.13
RPS3AP61247 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
RPS3AP61247 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
RPS3AP61247 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RPS3AP61247 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RPS3AP61247 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.21□□□□□ -0.14
RPS3AP61247 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
RPS3AP61247 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.21□□□□□ -0.14
RPS3AP61247 CES1P1-201ENST00000421606 1704 ntBASIC14.21□□□□□ -0.14
RPS3AP61247 AL359881.3-201ENST00000602640 1721 ntBASIC14.21□□□□□ -0.14
RPS3AP61247 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPS3AP61247 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPS3AP61247 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.21□□□□□ -0.14
RPS3AP61247 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
RPS3AP61247 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.2□□□□□ -0.14
RPS3AP61247 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.2□□□□□ -0.14
RPS3AP61247 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 HNRNPUP1-201ENST00000554987 333 ntBASIC14.2□□□□□ -0.14
RPS3AP61247 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
RPS3AP61247 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 AC018892.3-201ENST00000623986 2499 ntBASIC14.2□□□□□ -0.14
RPS3AP61247 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RPS3AP61247 AC092135.3-201ENST00000624151 1846 ntBASIC14.2□□□□□ -0.14
RPS3AP61247 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPS3AP61247 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.19□□□□□ -0.14
RPS3AP61247 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPS3AP61247 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RPS3AP61247 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RPS3AP61247 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RPS3AP61247 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPS3AP61247 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.19□□□□□ -0.14
RPS3AP61247 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms