Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
GFRA1P56159 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
GFRA1P56159 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.42□□□□□ -0.26
GFRA1P56159 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GFRA1P56159 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GFRA1P56159 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GFRA1P56159 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.42□□□□□ -0.26
GFRA1P56159 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GFRA1P56159 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GFRA1P56159 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GFRA1P56159 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
GFRA1P56159 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.41□□□□□ -0.26
GFRA1P56159 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
GFRA1P56159 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.41□□□□□ -0.26
GFRA1P56159 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GFRA1P56159 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.41□□□□□ -0.26
GFRA1P56159 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
GFRA1P56159 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
GFRA1P56159 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.41□□□□□ -0.26
GFRA1P56159 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.41□□□□□ -0.26
GFRA1P56159 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.41□□□□□ -0.26
GFRA1P56159 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
GFRA1P56159 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
GFRA1P56159 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.41□□□□□ -0.26
GFRA1P56159 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
GFRA1P56159 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.41□□□□□ -0.26
GFRA1P56159 POM121L10P-201ENST00000436994 1285 ntBASIC13.41□□□□□ -0.26
GFRA1P56159 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.41□□□□□ -0.26
GFRA1P56159 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
GFRA1P56159 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.41□□□□□ -0.26
GFRA1P56159 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.41□□□□□ -0.26
GFRA1P56159 AC008825.2-201ENST00000603374 718 ntBASIC13.41□□□□□ -0.26
GFRA1P56159 AL008638.5-201ENST00000623814 1298 ntBASIC13.41□□□□□ -0.26
GFRA1P56159 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 AJ011931.1-201ENST00000618749 2492 ntBASIC13.41□□□□□ -0.26
GFRA1P56159 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.41□□□□□ -0.26
GFRA1P56159 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.41□□□□□ -0.26
GFRA1P56159 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GFRA1P56159 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 SHC1P1-201ENST00000425230 1745 ntBASIC13.41□□□□□ -0.26
GFRA1P56159 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GFRA1P56159 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.41□□□□□ -0.26
GFRA1P56159 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GFRA1P56159 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.4□□□□□ -0.26
GFRA1P56159 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GFRA1P56159 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.4□□□□□ -0.26
GFRA1P56159 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 CICP23-201ENST00000605013 2741 ntBASIC13.4□□□□□ -0.26
GFRA1P56159 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.4□□□□□ -0.26
GFRA1P56159 AC006033.1-201ENST00000440505 426 ntBASIC13.4□□□□□ -0.26
GFRA1P56159 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 AC104306.2-201ENST00000451877 341 ntBASIC13.4□□□□□ -0.26
GFRA1P56159 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.4□□□□□ -0.26
GFRA1P56159 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.4□□□□□ -0.26
GFRA1P56159 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.4□□□□□ -0.26
GFRA1P56159 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.4□□□□□ -0.26
GFRA1P56159 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.4□□□□□ -0.26
GFRA1P56159 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.4□□□□□ -0.26
GFRA1P56159 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.4□□□□□ -0.26
GFRA1P56159 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms