Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-5P52952 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 AC011467.2-201ENST00000598425 242 ntBASIC12.77□□□□□ -0.37
NKX2-5P52952 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-5P52952 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-5P52952 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-5P52952 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NKX2-5P52952 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-5P52952 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NKX2-5P52952 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
NKX2-5P52952 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 AC007787.1-201ENST00000588095 1583 ntBASIC12.77□□□□□ -0.37
NKX2-5P52952 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-5P52952 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-5P52952 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-5P52952 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-5P52952 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-5P52952 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-5P52952 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX2-5P52952 HCG4-201ENST00000418983 998 ntBASIC12.76□□□□□ -0.37
NKX2-5P52952 FAM201B-201ENST00000458407 597 ntBASIC12.76□□□□□ -0.37
NKX2-5P52952 SLC25A6P2-201ENST00000497974 877 ntBASIC12.76□□□□□ -0.37
NKX2-5P52952 AC107918.2-201ENST00000530817 355 ntBASIC12.76□□□□□ -0.37
NKX2-5P52952 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-5P52952 RNF126P1-202ENST00000569893 925 ntBASIC12.76□□□□□ -0.37
NKX2-5P52952 AP001412.1-201ENST00000608405 714 ntBASIC12.76□□□□□ -0.37
NKX2-5P52952 AL353801.3-201ENST00000609898 542 ntBASIC12.76□□□□□ -0.37
NKX2-5P52952 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-5P52952 AL023973.1-201ENST00000624619 620 ntBASIC12.76□□□□□ -0.37
NKX2-5P52952 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
NKX2-5P52952 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-5P52952 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-5P52952 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-5P52952 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-5P52952 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-5P52952 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NKX2-5P52952 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-5P52952 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-5P52952 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-5P52952 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 ABHD17AP1-201ENST00000358206 933 ntBASIC12.75□□□□□ -0.37
NKX2-5P52952 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-5P52952 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX2-5P52952 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-5P52952 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 NSUN5P2-203ENST00000457352 1529 ntBASIC12.75□□□□□ -0.37
NKX2-5P52952 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
NKX2-5P52952 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 AC009533.2-201ENST00000543664 586 ntBASIC12.75□□□□□ -0.37
NKX2-5P52952 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-5P52952 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX2-5P52952 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-5P52952 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-5P52952 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX2-5P52952 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-5P52952 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-5P52952 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NKX2-5P52952 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-5P52952 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-5P52952 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms