Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.8□□□□□ -0.04
GTF2A1P52655 WASH3P-207ENST00000560956 1394 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 FO538757.1-201ENST00000623083 1397 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.8□□□□□ -0.04
GTF2A1P52655 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GTF2A1P52655 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC14.8□□□□□ -0.04
GTF2A1P52655 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GTF2A1P52655 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GTF2A1P52655 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.8□□□□□ -0.04
GTF2A1P52655 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 AC092139.4-201ENST00000624318 2794 ntBASIC14.79□□□□□ -0.04
GTF2A1P52655 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
GTF2A1P52655 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GTF2A1P52655 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GTF2A1P52655 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
GTF2A1P52655 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.79□□□□□ -0.04
GTF2A1P52655 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.79□□□□□ -0.04
GTF2A1P52655 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.79□□□□□ -0.04
GTF2A1P52655 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 KRT8P22-201ENST00000562317 1415 ntBASIC14.79□□□□□ -0.04
GTF2A1P52655 AC233702.3-201ENST00000578656 1387 ntBASIC14.79□□□□□ -0.04
GTF2A1P52655 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.79□□□□□ -0.04
GTF2A1P52655 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.79□□□□□ -0.04
GTF2A1P52655 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
GTF2A1P52655 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GTF2A1P52655 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GTF2A1P52655 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC14.79□□□□□ -0.04
GTF2A1P52655 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
GTF2A1P52655 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 AC126564.1-201ENST00000623628 2013 ntBASIC14.78□□□□□ -0.04
GTF2A1P52655 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GTF2A1P52655 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
GTF2A1P52655 AC055811.4-201ENST00000624039 1754 ntBASIC14.78□□□□□ -0.04
GTF2A1P52655 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.78□□□□□ -0.04
GTF2A1P52655 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.78□□□□□ -0.04
GTF2A1P52655 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 AC016734.2-201ENST00000624325 1377 ntBASIC14.78□□□□□ -0.04
GTF2A1P52655 AL590787.1-201ENST00000568856 1315 ntBASIC14.78□□□□□ -0.04
GTF2A1P52655 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 BX276092.5-203ENST00000456199 560 ntBASIC14.78□□□□□ -0.04
GTF2A1P52655 MINOS1P3-201ENST00000457048 203 ntBASIC14.78□□□□□ -0.04
GTF2A1P52655 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.78□□□□□ -0.04
GTF2A1P52655 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GTF2A1P52655 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.78□□□□□ -0.04
GTF2A1P52655 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.78□□□□□ -0.04
GTF2A1P52655 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GTF2A1P52655 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms