Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL645937.2-201ENST00000396808 931 ntBASIC13.27□□□□□ -0.29
CX3CR1P49238 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.27□□□□□ -0.29
CX3CR1P49238 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.27□□□□□ -0.29
CX3CR1P49238 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.27□□□□□ -0.29
CX3CR1P49238 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.27□□□□□ -0.29
CX3CR1P49238 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.27□□□□□ -0.29
CX3CR1P49238 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.27□□□□□ -0.29
CX3CR1P49238 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.27□□□□□ -0.29
CX3CR1P49238 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.27□□□□□ -0.29
CX3CR1P49238 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.27□□□□□ -0.29
CX3CR1P49238 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 RFPL4AP1-201ENST00000530883 850 ntBASIC13.27□□□□□ -0.29
CX3CR1P49238 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.27□□□□□ -0.29
CX3CR1P49238 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
CX3CR1P49238 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CX3CR1P49238 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.27□□□□□ -0.29
CX3CR1P49238 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 AL137783.1-201ENST00000623494 1896 ntBASIC13.27□□□□□ -0.29
CX3CR1P49238 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CX3CR1P49238 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.27□□□□□ -0.29
CX3CR1P49238 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.27□□□□□ -0.29
CX3CR1P49238 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.26□□□□□ -0.29
CX3CR1P49238 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.26□□□□□ -0.29
CX3CR1P49238 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.26□□□□□ -0.29
CX3CR1P49238 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 HLA-K-203ENST00000430151 1046 ntBASIC13.26□□□□□ -0.29
CX3CR1P49238 GNAQP1-201ENST00000444815 1067 ntBASIC13.26□□□□□ -0.29
CX3CR1P49238 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.26□□□□□ -0.29
CX3CR1P49238 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.26□□□□□ -0.29
CX3CR1P49238 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.26□□□□□ -0.29
CX3CR1P49238 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.26□□□□□ -0.29
CX3CR1P49238 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.26□□□□□ -0.29
CX3CR1P49238 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.26□□□□□ -0.29
CX3CR1P49238 RRP7BP-205ENST00000566851 833 ntBASIC13.26□□□□□ -0.29
CX3CR1P49238 AC093813.1-201ENST00000605066 256 ntBASIC13.26□□□□□ -0.29
CX3CR1P49238 GPALPP1-207ENST00000611650 899 ntBASIC13.26□□□□□ -0.29
CX3CR1P49238 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 AL662799.1-202ENST00000614205 422 ntBASIC13.26□□□□□ -0.29
CX3CR1P49238 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 AC041040.2-201ENST00000622926 2899 ntBASIC13.26□□□□□ -0.29
CX3CR1P49238 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CX3CR1P49238 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CX3CR1P49238 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CX3CR1P49238 AC005840.4-201ENST00000541242 2494 ntBASIC13.25□□□□□ -0.29
CX3CR1P49238 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CX3CR1P49238 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms