Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 GIMAP3P-201ENST00000495150 836 ntBASIC13.42□□□□□ -0.26
CSNK1A1P48729 AC022137.2-201ENST00000503482 481 ntBASIC13.42□□□□□ -0.26
CSNK1A1P48729 TDH-203ENST00000531764 1110 ntBASIC13.42□□□□□ -0.26
CSNK1A1P48729 PTP4A1P2-201ENST00000546033 454 ntBASIC13.42□□□□□ -0.26
CSNK1A1P48729 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 AL009178.2-201ENST00000597278 2719 ntBASIC13.42□□□□□ -0.26
CSNK1A1P48729 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 INTS4P1-203ENST00000641008 3683 ntBASIC13.42□□□□□ -0.26
CSNK1A1P48729 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSNK1A1P48729 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CSNK1A1P48729 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 CICP14-201ENST00000629111 2732 ntBASIC13.41□□□□□ -0.26
CSNK1A1P48729 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 RN7SL692P-201ENST00000464677 288 ntBASIC13.41□□□□□ -0.26
CSNK1A1P48729 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 DUX4L47-201ENST00000566374 394 ntBASIC13.41□□□□□ -0.26
CSNK1A1P48729 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 AC010319.3-201ENST00000597028 470 ntBASIC13.41□□□□□ -0.26
CSNK1A1P48729 AL358472.5-202ENST00000641448 1267 ntBASIC13.41□□□□□ -0.26
CSNK1A1P48729 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSNK1A1P48729 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.41□□□□□ -0.26
CSNK1A1P48729 AC106881.1-201ENST00000605849 3329 ntBASIC13.41□□□□□ -0.26
CSNK1A1P48729 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 ACTG1P3-201ENST00000431775 1114 ntBASIC13.4□□□□□ -0.26
CSNK1A1P48729 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms