Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.55■□□□□ 0.24
RFC5P40937 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.55■□□□□ 0.24
RFC5P40937 AC005695.3-201ENST00000614522 232 ntBASIC16.55■□□□□ 0.24
RFC5P40937 AL096828.3-201ENST00000615354 462 ntBASIC16.55■□□□□ 0.24
RFC5P40937 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC5P40937 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC5P40937 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC5P40937 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RFC5P40937 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC5P40937 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC5P40937 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC5P40937 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC5P40937 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC5P40937 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC5P40937 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC5P40937 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC5P40937 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RFC5P40937 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RFC5P40937 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC5P40937 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.54■□□□□ 0.24
RFC5P40937 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RFC5P40937 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC5P40937 MIR663B-201ENST00000408361 115 ntBASIC16.54■□□□□ 0.24
RFC5P40937 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.54■□□□□ 0.24
RFC5P40937 AC131206.1-201ENST00000538078 1211 ntBASIC16.54■□□□□ 0.24
RFC5P40937 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RFC5P40937 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.54■□□□□ 0.24
RFC5P40937 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC5P40937 MIR4525-201ENST00000580000 75 ntBASIC16.54■□□□□ 0.24
RFC5P40937 AC104982.3-201ENST00000581995 514 ntBASIC16.54■□□□□ 0.24
RFC5P40937 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC5P40937 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.54■□□□□ 0.24
RFC5P40937 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RFC5P40937 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC5P40937 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC5P40937 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RFC5P40937 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC5P40937 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.54■□□□□ 0.24
RFC5P40937 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC5P40937 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RFC5P40937 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC5P40937 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RFC5P40937 NFIC-211ENST00000641145 8399 ntBASIC16.53■□□□□ 0.24
RFC5P40937 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RFC5P40937 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC5P40937 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RFC5P40937 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.53■□□□□ 0.24
RFC5P40937 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC5P40937 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.53■□□□□ 0.24
RFC5P40937 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.53■□□□□ 0.24
RFC5P40937 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC5P40937 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.53■□□□□ 0.24
RFC5P40937 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC5P40937 GCOM2-201ENST00000509133 1104 ntBASIC16.53■□□□□ 0.24
RFC5P40937 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC5P40937 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RFC5P40937 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC5P40937 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms