Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFC1P35251 RPSAP52-203ENST00000622976 1023 ntBASIC15.88■□□□□ 0.13
RFC1P35251 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
RFC1P35251 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFC1P35251 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFC1P35251 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
RFC1P35251 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC1P35251 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC1P35251 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC1P35251 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.87■□□□□ 0.13
RFC1P35251 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 AC055811.4-201ENST00000624039 1754 ntBASIC15.87■□□□□ 0.13
RFC1P35251 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC1P35251 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC1P35251 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.87■□□□□ 0.13
RFC1P35251 FAM45BP-202ENST00000592932 1624 ntBASIC15.87■□□□□ 0.13
RFC1P35251 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.87■□□□□ 0.13
RFC1P35251 AC026434.2-201ENST00000506094 1078 ntBASIC15.87■□□□□ 0.13
RFC1P35251 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC1P35251 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.87■□□□□ 0.13
RFC1P35251 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.87■□□□□ 0.13
RFC1P35251 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.87■□□□□ 0.13
RFC1P35251 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.87■□□□□ 0.13
RFC1P35251 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.87■□□□□ 0.13
RFC1P35251 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RFC1P35251 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC1P35251 INTS4P1-203ENST00000641008 3683 ntBASIC15.87■□□□□ 0.13
RFC1P35251 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RFC1P35251 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC1P35251 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC1P35251 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.87■□□□□ 0.13
RFC1P35251 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC1P35251 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RFC1P35251 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RFC1P35251 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RFC1P35251 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RFC1P35251 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RFC1P35251 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.86■□□□□ 0.13
RFC1P35251 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RFC1P35251 ACTBP8-201ENST00000403258 1108 ntBASIC15.86■□□□□ 0.13
RFC1P35251 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RFC1P35251 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 GIMAP3P-201ENST00000495150 836 ntBASIC15.86■□□□□ 0.13
RFC1P35251 AC022137.2-201ENST00000503482 481 ntBASIC15.86■□□□□ 0.13
RFC1P35251 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.86■□□□□ 0.13
RFC1P35251 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms