Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSP1P33241 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.13■□□□□ 0.01
LSP1P33241 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.13■□□□□ 0.01
LSP1P33241 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LSP1P33241 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSP1P33241 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSP1P33241 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LSP1P33241 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
LSP1P33241 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LSP1P33241 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.12■□□□□ 0.01
LSP1P33241 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 AKR1C7P-201ENST00000305623 895 ntBASIC15.12■□□□□ 0.01
LSP1P33241 RPS2P28-201ENST00000314255 741 ntBASIC15.12■□□□□ 0.01
LSP1P33241 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.12■□□□□ 0.01
LSP1P33241 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.12■□□□□ 0.01
LSP1P33241 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.12■□□□□ 0.01
LSP1P33241 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
LSP1P33241 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.12■□□□□ 0.01
LSP1P33241 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.12■□□□□ 0.01
LSP1P33241 AC012640.2-201ENST00000561606 901 ntBASIC15.12■□□□□ 0.01
LSP1P33241 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.12■□□□□ 0.01
LSP1P33241 AC025181.2-201ENST00000606994 802 ntBASIC15.12■□□□□ 0.01
LSP1P33241 AC026979.3-201ENST00000607315 403 ntBASIC15.12■□□□□ 0.01
LSP1P33241 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.12■□□□□ 0.01
LSP1P33241 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 AC010507.1-201ENST00000633895 436 ntBASIC15.12■□□□□ 0.01
LSP1P33241 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.12■□□□□ 0.01
LSP1P33241 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.12■□□□□ 0.01
LSP1P33241 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
LSP1P33241 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LSP1P33241 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LSP1P33241 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.12■□□□□ 0.01
LSP1P33241 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LSP1P33241 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
LSP1P33241 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.11■□□□□ 0.01
LSP1P33241 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC15.11■□□□□ 0.01
LSP1P33241 VN2R19P-201ENST00000442399 1052 ntBASIC15.11■□□□□ 0.01
LSP1P33241 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.11■□□□□ 0.01
LSP1P33241 AF238378.1-201ENST00000526806 358 ntBASIC15.11■□□□□ 0.01
LSP1P33241 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.11■□□□□ 0.01
LSP1P33241 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 AC096734.2-201ENST00000562054 433 ntBASIC15.11■□□□□ 0.01
LSP1P33241 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.11■□□□□ 0.01
LSP1P33241 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LSP1P33241 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC15.11■□□□□ 0.01
LSP1P33241 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSP1P33241 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms