Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SHC1P1-201ENST00000425230 1745 ntBASIC16.84■□□□□ 0.29
CIITAP33076 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CIITAP33076 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CIITAP33076 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CIITAP33076 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CIITAP33076 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CIITAP33076 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CIITAP33076 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.84■□□□□ 0.29
CIITAP33076 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.84■□□□□ 0.29
CIITAP33076 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CIITAP33076 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CIITAP33076 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CIITAP33076 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CIITAP33076 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
CIITAP33076 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CIITAP33076 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 AL354877.1-201ENST00000424412 413 ntBASIC16.83■□□□□ 0.28
CIITAP33076 PUDPP3-201ENST00000445368 636 ntBASIC16.83■□□□□ 0.28
CIITAP33076 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.83■□□□□ 0.28
CIITAP33076 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.83■□□□□ 0.28
CIITAP33076 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CIITAP33076 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.83■□□□□ 0.28
CIITAP33076 AL096828.3-201ENST00000615354 462 ntBASIC16.83■□□□□ 0.28
CIITAP33076 AL136301.1-201ENST00000615830 422 ntBASIC16.83■□□□□ 0.28
CIITAP33076 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CIITAP33076 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CIITAP33076 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.83■□□□□ 0.28
CIITAP33076 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CIITAP33076 AC103702.1-201ENST00000548801 2630 ntBASIC16.83■□□□□ 0.28
CIITAP33076 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CIITAP33076 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CIITAP33076 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CIITAP33076 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CIITAP33076 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
CIITAP33076 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.82■□□□□ 0.28
CIITAP33076 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 CICP14-201ENST00000629111 2732 ntBASIC16.82■□□□□ 0.28
CIITAP33076 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CIITAP33076 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.82■□□□□ 0.28
CIITAP33076 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.82■□□□□ 0.28
CIITAP33076 AC092658.1-201ENST00000505836 891 ntBASIC16.82■□□□□ 0.28
CIITAP33076 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CIITAP33076 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.82■□□□□ 0.28
CIITAP33076 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.82■□□□□ 0.28
CIITAP33076 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.82■□□□□ 0.28
CIITAP33076 AC009955.4-201ENST00000597192 544 ntBASIC16.82■□□□□ 0.28
CIITAP33076 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.82■□□□□ 0.28
CIITAP33076 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.82■□□□□ 0.28
CIITAP33076 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.82■□□□□ 0.28
CIITAP33076 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.82■□□□□ 0.28
CIITAP33076 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.82■□□□□ 0.28
CIITAP33076 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.82■□□□□ 0.28
CIITAP33076 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CIITAP33076 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CIITAP33076 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CIITAP33076 AC092135.3-201ENST00000624151 1846 ntBASIC16.82■□□□□ 0.28
CIITAP33076 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CIITAP33076 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CIITAP33076 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CIITAP33076 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.81■□□□□ 0.28
CIITAP33076 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CIITAP33076 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CIITAP33076 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CIITAP33076 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CIITAP33076 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CIITAP33076 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CIITAP33076 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CIITAP33076 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.81■□□□□ 0.28
CIITAP33076 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CIITAP33076 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CIITAP33076 FAM86MP-201ENST00000340703 885 ntBASIC16.81■□□□□ 0.28
CIITAP33076 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.81■□□□□ 0.28
CIITAP33076 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.81■□□□□ 0.28
CIITAP33076 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms