Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA5P30532 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.09■□□□□ 0.49
CHRNA5P30532 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHRNA5P30532 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CHRNA5P30532 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHRNA5P30532 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA5P30532 AC073869.2-201ENST00000417338 1026 ntBASIC18.09■□□□□ 0.49
CHRNA5P30532 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.09■□□□□ 0.49
CHRNA5P30532 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 RN7SL277P-201ENST00000481521 288 ntBASIC18.09■□□□□ 0.49
CHRNA5P30532 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA5P30532 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA5P30532 RN7SL357P-201ENST00000581065 298 ntBASIC18.09■□□□□ 0.49
CHRNA5P30532 HMGB1P24-201ENST00000611897 328 ntBASIC18.09■□□□□ 0.49
CHRNA5P30532 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.09■□□□□ 0.49
CHRNA5P30532 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CHRNA5P30532 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.09■□□□□ 0.49
CHRNA5P30532 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC18.09■□□□□ 0.49
CHRNA5P30532 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHRNA5P30532 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA5P30532 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHRNA5P30532 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA5P30532 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA5P30532 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.09■□□□□ 0.49
CHRNA5P30532 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.08■□□□□ 0.49
CHRNA5P30532 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA5P30532 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA5P30532 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.08■□□□□ 0.49
CHRNA5P30532 AC021305.1-201ENST00000520656 1514 ntBASIC18.08■□□□□ 0.49
CHRNA5P30532 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.08■□□□□ 0.49
CHRNA5P30532 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA5P30532 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA5P30532 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.08■□□□□ 0.49
CHRNA5P30532 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA5P30532 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA5P30532 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.08■□□□□ 0.49
CHRNA5P30532 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA5P30532 MRPL37P1-201ENST00000592451 1337 ntBASIC18.08■□□□□ 0.49
CHRNA5P30532 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRNA5P30532 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA5P30532 ERP29P1-201ENST00000442902 706 ntBASIC18.08■□□□□ 0.48
CHRNA5P30532 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRNA5P30532 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRNA5P30532 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.08■□□□□ 0.48
CHRNA5P30532 AC027139.1-201ENST00000565286 951 ntBASIC18.08■□□□□ 0.48
CHRNA5P30532 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA5P30532 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA5P30532 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRNA5P30532 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CHRNA5P30532 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA5P30532 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA5P30532 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA5P30532 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHRNA5P30532 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA5P30532 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CHRNA5P30532 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHRNA5P30532 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA5P30532 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA5P30532 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CHRNA5P30532 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.08■□□□□ 0.48
CHRNA5P30532 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA5P30532 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA5P30532 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHRNA5P30532 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRNA5P30532 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CHRNA5P30532 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 RPL18AP8-201ENST00000486071 528 ntBASIC18.07■□□□□ 0.48
CHRNA5P30532 MIR2392-201ENST00000584881 84 ntBASIC18.07■□□□□ 0.48
CHRNA5P30532 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.07■□□□□ 0.48
CHRNA5P30532 AC007250.1-201ENST00000608934 338 ntBASIC18.07■□□□□ 0.48
CHRNA5P30532 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 AC009145.4-201ENST00000625119 1294 ntBASIC18.07■□□□□ 0.48
CHRNA5P30532 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHRNA5P30532 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA5P30532 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms