Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
PTPN6P29350 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PTPN6P29350 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PTPN6P29350 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.28□□□□□ -0.12
PTPN6P29350 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.28□□□□□ -0.12
PTPN6P29350 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 DGCR5-201ENST00000399539 862 ntBASIC14.28□□□□□ -0.12
PTPN6P29350 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.28□□□□□ -0.12
PTPN6P29350 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.28□□□□□ -0.12
PTPN6P29350 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 AL138799.1-201ENST00000448213 1675 ntBASIC14.28□□□□□ -0.12
PTPN6P29350 MYCLP2-201ENST00000449268 967 ntBASIC14.28□□□□□ -0.12
PTPN6P29350 RN7SL692P-201ENST00000464677 288 ntBASIC14.28□□□□□ -0.12
PTPN6P29350 RN7SL399P-201ENST00000471648 279 ntBASIC14.28□□□□□ -0.12
PTPN6P29350 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.28□□□□□ -0.12
PTPN6P29350 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.28□□□□□ -0.12
PTPN6P29350 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.28□□□□□ -0.12
PTPN6P29350 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.28□□□□□ -0.12
PTPN6P29350 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.28□□□□□ -0.12
PTPN6P29350 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 AC005225.4-201ENST00000557330 545 ntBASIC14.28□□□□□ -0.12
PTPN6P29350 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 AL596325.1-201ENST00000563991 1082 ntBASIC14.28□□□□□ -0.12
PTPN6P29350 WASH4P-201ENST00000564273 1246 ntBASIC14.28□□□□□ -0.12
PTPN6P29350 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PTPN6P29350 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.28□□□□□ -0.12
PTPN6P29350 AC036164.1-201ENST00000570544 333 ntBASIC14.28□□□□□ -0.12
PTPN6P29350 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.28□□□□□ -0.12
PTPN6P29350 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
PTPN6P29350 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PTPN6P29350 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.28□□□□□ -0.12
PTPN6P29350 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.28□□□□□ -0.12
PTPN6P29350 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PTPN6P29350 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.28□□□□□ -0.12
PTPN6P29350 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PTPN6P29350 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTPN6P29350 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PTPN6P29350 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PTPN6P29350 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.27□□□□□ -0.12
PTPN6P29350 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
PTPN6P29350 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTPN6P29350 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.27□□□□□ -0.12
PTPN6P29350 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTPN6P29350 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PTPN6P29350 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PTPN6P29350 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PTPN6P29350 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTPN6P29350 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTPN6P29350 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.27□□□□□ -0.12
PTPN6P29350 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PTPN6P29350 KRT8P14-201ENST00000414254 1442 ntBASIC14.27□□□□□ -0.12
PTPN6P29350 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTPN6P29350 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PTPN6P29350 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PTPN6P29350 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.27□□□□□ -0.13
PTPN6P29350 AL645937.2-201ENST00000396808 931 ntBASIC14.27□□□□□ -0.13
PTPN6P29350 AC098850.1-201ENST00000419919 790 ntBASIC14.27□□□□□ -0.13
PTPN6P29350 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.27□□□□□ -0.13
PTPN6P29350 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PTPN6P29350 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PTPN6P29350 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.27□□□□□ -0.13
PTPN6P29350 AC107373.2-201ENST00000607735 490 ntBASIC14.27□□□□□ -0.13
PTPN6P29350 AC012645.4-201ENST00000610691 1061 ntBASIC14.27□□□□□ -0.13
PTPN6P29350 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PTPN6P29350 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.27□□□□□ -0.13
PTPN6P29350 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PTPN6P29350 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PTPN6P29350 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms