Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 TPM3P8-201ENST00000330554 643 ntBASIC14.29□□□□□ -0.12
MMP11P24347 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.29□□□□□ -0.12
MMP11P24347 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.29□□□□□ -0.12
MMP11P24347 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 FAM8A2P-201ENST00000528813 1142 ntBASIC14.29□□□□□ -0.12
MMP11P24347 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.29□□□□□ -0.12
MMP11P24347 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP11P24347 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.29□□□□□ -0.12
MMP11P24347 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP11P24347 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 AC009542.2-202ENST00000619004 1067 ntBASIC14.29□□□□□ -0.12
MMP11P24347 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP11P24347 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP11P24347 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
MMP11P24347 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
MMP11P24347 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP11P24347 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP11P24347 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP11P24347 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP11P24347 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
MMP11P24347 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
MMP11P24347 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP11P24347 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP11P24347 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP11P24347 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP11P24347 AL590640.2-201ENST00000457038 527 ntBASIC14.28□□□□□ -0.12
MMP11P24347 RPL13AP20-201ENST00000459725 609 ntBASIC14.28□□□□□ -0.12
MMP11P24347 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP11P24347 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP11P24347 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.28□□□□□ -0.12
MMP11P24347 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP11P24347 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP11P24347 PCDHA3-202ENST00000532566 4594 ntBASIC14.28□□□□□ -0.12
MMP11P24347 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP11P24347 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP11P24347 WASH3P-207ENST00000560956 1394 ntBASIC14.28□□□□□ -0.12
MMP11P24347 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP11P24347 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.28□□□□□ -0.12
MMP11P24347 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 AC005912.2-201ENST00000619492 2400 ntBASIC14.28□□□□□ -0.12
MMP11P24347 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 AL603764.1-201ENST00000636452 321 ntBASIC14.28□□□□□ -0.12
MMP11P24347 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.28□□□□□ -0.12
MMP11P24347 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP11P24347 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms