Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.91□□□□□ -0.34
CCL1P22362 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL1P22362 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.91□□□□□ -0.34
CCL1P22362 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.91□□□□□ -0.34
CCL1P22362 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.91□□□□□ -0.34
CCL1P22362 AP001063.1-201ENST00000568332 529 ntBASIC12.91□□□□□ -0.34
CCL1P22362 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CCL1P22362 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL1P22362 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.91□□□□□ -0.34
CCL1P22362 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL1P22362 AC011474.4-201ENST00000623523 2076 ntBASIC12.91□□□□□ -0.34
CCL1P22362 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CCL1P22362 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 AL136172.1-201ENST00000598590 1394 ntBASIC12.91□□□□□ -0.34
CCL1P22362 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CCL1P22362 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL1P22362 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 KRT8P35-201ENST00000483942 1338 ntBASIC12.9□□□□□ -0.34
CCL1P22362 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL1P22362 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL1P22362 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CCL1P22362 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
CCL1P22362 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.9□□□□□ -0.34
CCL1P22362 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL1P22362 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CCL1P22362 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CCL1P22362 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CCL1P22362 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL1P22362 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL1P22362 AC087499.6-201ENST00000411576 835 ntBASIC12.9□□□□□ -0.34
CCL1P22362 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL1P22362 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.9□□□□□ -0.34
CCL1P22362 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 MYCLP2-201ENST00000449268 967 ntBASIC12.9□□□□□ -0.34
CCL1P22362 UGT1A2P-201ENST00000454886 866 ntBASIC12.9□□□□□ -0.34
CCL1P22362 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL1P22362 INGX-202ENST00000489074 768 ntBASIC12.9□□□□□ -0.34
CCL1P22362 AC022137.2-201ENST00000503482 481 ntBASIC12.9□□□□□ -0.34
CCL1P22362 KRT18P25-201ENST00000508931 1278 ntBASIC12.9□□□□□ -0.34
CCL1P22362 GCOM2-201ENST00000509133 1104 ntBASIC12.9□□□□□ -0.34
CCL1P22362 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL1P22362 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL1P22362 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL1P22362 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.9□□□□□ -0.34
CCL1P22362 CLUHP6-201ENST00000580789 941 ntBASIC12.9□□□□□ -0.34
CCL1P22362 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CCL1P22362 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.9□□□□□ -0.34
CCL1P22362 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL1P22362 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL1P22362 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CCL1P22362 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CCL1P22362 AC020910.6-201ENST00000623084 1459 ntBASIC12.9□□□□□ -0.34
CCL1P22362 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CCL1P22362 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL1P22362 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CCL1P22362 AC117489.1-201ENST00000625169 3217 ntBASIC12.9□□□□□ -0.34
CCL1P22362 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.9□□□□□ -0.35
CCL1P22362 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CCL1P22362 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCL1P22362 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL1P22362 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms