Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MSR1P21757 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MSR1P21757 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MSR1P21757 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MSR1P21757 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
MSR1P21757 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MSR1P21757 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MSR1P21757 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.33□□□□□ -0.28
MSR1P21757 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MSR1P21757 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.32□□□□□ -0.28
MSR1P21757 AC018665.1-201ENST00000622927 1362 ntBASIC13.32□□□□□ -0.28
MSR1P21757 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.32□□□□□ -0.28
MSR1P21757 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.32□□□□□ -0.28
MSR1P21757 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.32□□□□□ -0.28
MSR1P21757 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
MSR1P21757 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
MSR1P21757 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
MSR1P21757 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
MSR1P21757 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
MSR1P21757 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
MSR1P21757 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
MSR1P21757 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 ACKR1-201ENST00000368121 1240 ntBASIC13.32□□□□□ -0.28
MSR1P21757 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
MSR1P21757 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.32□□□□□ -0.28
MSR1P21757 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.32□□□□□ -0.28
MSR1P21757 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
MSR1P21757 WASH4P-201ENST00000564273 1246 ntBASIC13.32□□□□□ -0.28
MSR1P21757 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
MSR1P21757 DUX4L47-201ENST00000566374 394 ntBASIC13.32□□□□□ -0.28
MSR1P21757 TP53TG3HP-202ENST00000569755 579 ntBASIC13.32□□□□□ -0.28
MSR1P21757 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.32□□□□□ -0.28
MSR1P21757 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
MSR1P21757 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.32□□□□□ -0.28
MSR1P21757 WFDC1-204ENST00000613603 549 ntBASIC13.32□□□□□ -0.28
MSR1P21757 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.32□□□□□ -0.28
MSR1P21757 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.32□□□□□ -0.28
MSR1P21757 AC023090.2-201ENST00000625182 2110 ntBASIC13.32□□□□□ -0.28
MSR1P21757 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
MSR1P21757 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
MSR1P21757 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.32□□□□□ -0.28
MSR1P21757 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
MSR1P21757 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
MSR1P21757 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
MSR1P21757 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MSR1P21757 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
MSR1P21757 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.32□□□□□ -0.28
MSR1P21757 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.31□□□□□ -0.28
MSR1P21757 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.31□□□□□ -0.28
MSR1P21757 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
MSR1P21757 LINC00552-201ENST00000625151 2579 ntBASIC13.31□□□□□ -0.28
MSR1P21757 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
MSR1P21757 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.31□□□□□ -0.28
MSR1P21757 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MSR1P21757 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MSR1P21757 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.31□□□□□ -0.28
MSR1P21757 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.31□□□□□ -0.28
MSR1P21757 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
MSR1P21757 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.31□□□□□ -0.28
MSR1P21757 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
MSR1P21757 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.31□□□□□ -0.28
MSR1P21757 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MSR1P21757 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
MSR1P21757 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms