Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC172P0C7W6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC172P0C7W6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC172P0C7W6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC172P0C7W6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC172P0C7W6 AC018529.2-202ENST00000611482 3087 ntBASIC16.34■□□□□ 0.21
CCDC172P0C7W6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 AC005912.2-201ENST00000619492 2400 ntBASIC16.34■□□□□ 0.21
CCDC172P0C7W6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 AL353779.1-201ENST00000434793 351 ntBASIC16.34■□□□□ 0.21
CCDC172P0C7W6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 RN7SL399P-201ENST00000471648 279 ntBASIC16.34■□□□□ 0.21
CCDC172P0C7W6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC172P0C7W6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CCDC172P0C7W6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC172P0C7W6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC172P0C7W6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC172P0C7W6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC172P0C7W6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 BASP1P1-201ENST00000430708 665 ntBASIC16.33■□□□□ 0.2
CCDC172P0C7W6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 TPRX2P-201ENST00000535362 881 ntBASIC16.33■□□□□ 0.2
CCDC172P0C7W6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 AL049840.4-201ENST00000602422 811 ntBASIC16.33■□□□□ 0.2
CCDC172P0C7W6 AC008738.7-201ENST00000609744 511 ntBASIC16.33■□□□□ 0.2
CCDC172P0C7W6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 AL158070.2-201ENST00000623713 1621 ntBASIC16.33■□□□□ 0.2
CCDC172P0C7W6 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 AC113367.3-201ENST00000508316 1912 ntBASIC16.33■□□□□ 0.2
CCDC172P0C7W6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 MTHFR-210ENST00000641407 2387 ntBASIC16.33■□□□□ 0.2
CCDC172P0C7W6 DGCR9-201ENST00000609630 2415 ntBASIC16.33■□□□□ 0.2
CCDC172P0C7W6 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC172P0C7W6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms