Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 AC018735.1-201ENST00000437208 1502 ntBASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 AC068587.10-201ENST00000641210 219 ntBASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 CICP13-201ENST00000422015 2789 ntBASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 AC012508.2-201ENST00000567613 1472 ntBASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AP000593.2-201ENST00000542775 1433 ntBASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AL009178.2-201ENST00000597278 2719 ntBASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AL354877.1-201ENST00000424412 413 ntBASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 HIST2H2BB-201ENST00000449108 381 ntBASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AC026434.2-201ENST00000506094 1078 ntBASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AC084346.2-201ENST00000607097 949 ntBASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AP001002.3-201ENST00000623482 206 ntBASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40ALP0C0E4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms