Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
SFTPBP07988 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SFTPBP07988 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 AL133267.1-201ENST00000398220 340 ntBASIC13.17□□□□□ -0.3
SFTPBP07988 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.17□□□□□ -0.3
SFTPBP07988 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.17□□□□□ -0.3
SFTPBP07988 AC015922.1-201ENST00000421102 1152 ntBASIC13.17□□□□□ -0.3
SFTPBP07988 GHSR-202ENST00000427970 912 ntBASIC13.17□□□□□ -0.3
SFTPBP07988 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.17□□□□□ -0.3
SFTPBP07988 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 COX20P2-201ENST00000452636 358 ntBASIC13.17□□□□□ -0.3
SFTPBP07988 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.17□□□□□ -0.3
SFTPBP07988 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.17□□□□□ -0.3
SFTPBP07988 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.17□□□□□ -0.3
SFTPBP07988 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.17□□□□□ -0.3
SFTPBP07988 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 AC009118.2-201ENST00000613275 655 ntBASIC13.17□□□□□ -0.3
SFTPBP07988 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 AC004840.1-201ENST00000636359 365 ntBASIC13.17□□□□□ -0.3
SFTPBP07988 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SFTPBP07988 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SFTPBP07988 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.17□□□□□ -0.3
SFTPBP07988 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.16□□□□□ -0.3
SFTPBP07988 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SFTPBP07988 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SFTPBP07988 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SFTPBP07988 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.16□□□□□ -0.3
SFTPBP07988 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.16□□□□□ -0.3
SFTPBP07988 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.16□□□□□ -0.3
SFTPBP07988 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 AC135586.1-201ENST00000539323 574 ntBASIC13.16□□□□□ -0.3
SFTPBP07988 AC044860.1-202ENST00000559481 777 ntBASIC13.16□□□□□ -0.3
SFTPBP07988 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.16□□□□□ -0.3
SFTPBP07988 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.16□□□□□ -0.3
SFTPBP07988 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.16□□□□□ -0.3
SFTPBP07988 AC004233.3-201ENST00000607794 1269 ntBASIC13.16□□□□□ -0.3
SFTPBP07988 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.16□□□□□ -0.3
SFTPBP07988 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SFTPBP07988 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.16□□□□□ -0.3
SFTPBP07988 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SFTPBP07988 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms