Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TPM3P06753 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM3P06753 INE2-201ENST00000630399 1874 ntBASIC16.93■□□□□ 0.3
TPM3P06753 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM3P06753 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM3P06753 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM3P06753 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TPM3P06753 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TPM3P06753 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM3P06753 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TPM3P06753 ALG1L8P-201ENST00000533887 760 ntBASIC16.92■□□□□ 0.3
TPM3P06753 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
TPM3P06753 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM3P06753 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM3P06753 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TPM3P06753 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TPM3P06753 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM3P06753 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM3P06753 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TPM3P06753 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM3P06753 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TPM3P06753 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM3P06753 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TPM3P06753 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM3P06753 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.91■□□□□ 0.3
TPM3P06753 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM3P06753 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TPM3P06753 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM3P06753 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TPM3P06753 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TPM3P06753 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TPM3P06753 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.91■□□□□ 0.3
TPM3P06753 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM3P06753 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 BANF1P1-201ENST00000553684 263 ntBASIC16.91■□□□□ 0.3
TPM3P06753 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.91■□□□□ 0.3
TPM3P06753 AC025181.2-201ENST00000606994 802 ntBASIC16.91■□□□□ 0.3
TPM3P06753 MIR6069-201ENST00000620069 79 ntBASIC16.91■□□□□ 0.3
TPM3P06753 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM3P06753 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM3P06753 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM3P06753 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TPM3P06753 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM3P06753 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TPM3P06753 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM3P06753 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms