Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 RCC2P8-201ENST00000502779 1035 ntBASIC14.67□□□□□ -0.06
WNT1P04628 SCARNA21-201ENST00000517026 139 ntBASIC14.67□□□□□ -0.06
WNT1P04628 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT1P04628 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.67□□□□□ -0.06
WNT1P04628 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.67□□□□□ -0.06
WNT1P04628 AC020922.3-201ENST00000595064 547 ntBASIC14.67□□□□□ -0.06
WNT1P04628 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
WNT1P04628 SPCS2P2-201ENST00000603270 608 ntBASIC14.67□□□□□ -0.06
WNT1P04628 AC008825.2-201ENST00000603374 718 ntBASIC14.67□□□□□ -0.06
WNT1P04628 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
WNT1P04628 AC023090.2-201ENST00000625182 2110 ntBASIC14.67□□□□□ -0.06
WNT1P04628 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT1P04628 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT1P04628 Z98259.2-201ENST00000641583 609 ntBASIC14.67□□□□□ -0.06
WNT1P04628 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
WNT1P04628 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT1P04628 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
WNT1P04628 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT1P04628 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 AC112693.3-201ENST00000624819 1983 ntBASIC14.67□□□□□ -0.06
WNT1P04628 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT1P04628 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
WNT1P04628 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
WNT1P04628 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT1P04628 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT1P04628 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT1P04628 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 REXO1L2P-201ENST00000425429 2069 ntBASIC14.66□□□□□ -0.06
WNT1P04628 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT1P04628 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 FAM90A7P-201ENST00000382628 1395 ntBASIC14.66□□□□□ -0.06
WNT1P04628 FAM90A23P-201ENST00000400136 1395 ntBASIC14.66□□□□□ -0.06
WNT1P04628 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT1P04628 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.66□□□□□ -0.06
WNT1P04628 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
WNT1P04628 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.66□□□□□ -0.06
WNT1P04628 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.66□□□□□ -0.06
WNT1P04628 AC012441.2-201ENST00000444843 739 ntBASIC14.66□□□□□ -0.06
WNT1P04628 MAGEA5-201ENST00000446757 942 ntBASIC14.66□□□□□ -0.06
WNT1P04628 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.66□□□□□ -0.06
WNT1P04628 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.66□□□□□ -0.06
WNT1P04628 AC005962.1-201ENST00000584100 773 ntBASIC14.66□□□□□ -0.06
WNT1P04628 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.66□□□□□ -0.06
WNT1P04628 AL353770.1-201ENST00000614915 403 ntBASIC14.66□□□□□ -0.06
WNT1P04628 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 C18orf15-201ENST00000623680 2534 ntBASIC14.66□□□□□ -0.06
WNT1P04628 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT1P04628 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT1P04628 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
WNT1P04628 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT1P04628 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
WNT1P04628 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT1P04628 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT1P04628 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT1P04628 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT1P04628 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
WNT1P04628 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
WNT1P04628 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms