Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VTNP04004 AC068587.8-201ENST00000641239 219 ntBASIC16.37■□□□□ 0.21
VTNP04004 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
VTNP04004 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VTNP04004 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.37■□□□□ 0.21
VTNP04004 TUBBP5-203ENST00000508529 1334 ntBASIC16.37■□□□□ 0.21
VTNP04004 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VTNP04004 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.37■□□□□ 0.21
VTNP04004 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VTNP04004 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 AC007292.2-201ENST00000593524 1812 ntBASIC16.36■□□□□ 0.21
VTNP04004 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VTNP04004 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.36■□□□□ 0.21
VTNP04004 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.36■□□□□ 0.21
VTNP04004 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.36■□□□□ 0.21
VTNP04004 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.36■□□□□ 0.21
VTNP04004 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.36■□□□□ 0.21
VTNP04004 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.36■□□□□ 0.21
VTNP04004 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.36■□□□□ 0.21
VTNP04004 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VTNP04004 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.36■□□□□ 0.21
VTNP04004 CICP23-201ENST00000605013 2741 ntBASIC16.36■□□□□ 0.21
VTNP04004 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VTNP04004 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VTNP04004 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.35■□□□□ 0.21
VTNP04004 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.35■□□□□ 0.21
VTNP04004 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.35■□□□□ 0.21
VTNP04004 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
VTNP04004 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 ZBED1P1-201ENST00000502364 1930 ntBASIC16.35■□□□□ 0.21
VTNP04004 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.35■□□□□ 0.21
VTNP04004 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.35■□□□□ 0.21
VTNP04004 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.35■□□□□ 0.21
VTNP04004 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.35■□□□□ 0.21
VTNP04004 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.35■□□□□ 0.21
VTNP04004 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.35■□□□□ 0.21
VTNP04004 GCOM2-201ENST00000509133 1104 ntBASIC16.35■□□□□ 0.21
VTNP04004 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.35■□□□□ 0.21
VTNP04004 AC131206.1-201ENST00000538078 1211 ntBASIC16.35■□□□□ 0.21
VTNP04004 RHOQP1-201ENST00000555758 579 ntBASIC16.35■□□□□ 0.21
VTNP04004 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.35■□□□□ 0.21
VTNP04004 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.35■□□□□ 0.21
VTNP04004 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 AC026740.1-201ENST00000607068 791 ntBASIC16.35■□□□□ 0.21
VTNP04004 AC090164.2-201ENST00000611487 516 ntBASIC16.35■□□□□ 0.21
VTNP04004 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.35■□□□□ 0.21
VTNP04004 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.35■□□□□ 0.21
VTNP04004 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.35■□□□□ 0.21
VTNP04004 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VTNP04004 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms