Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR6869-201ENST00000619434 62 ntBASIC13.44□□□□□ -0.26
CNOT4O95628 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.44□□□□□ -0.26
CNOT4O95628 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.44□□□□□ -0.26
CNOT4O95628 MSTO2P-201ENST00000314835 1709 ntBASIC13.44□□□□□ -0.26
CNOT4O95628 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.44□□□□□ -0.26
CNOT4O95628 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CNOT4O95628 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.44□□□□□ -0.26
CNOT4O95628 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CNOT4O95628 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 AL360270.3-201ENST00000609118 1348 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CNOT4O95628 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.43□□□□□ -0.26
CNOT4O95628 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CNOT4O95628 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CNOT4O95628 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CNOT4O95628 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 MIR1908-201ENST00000410394 80 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.43□□□□□ -0.26
CNOT4O95628 BCYRN1-201ENST00000418539 200 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.43□□□□□ -0.26
CNOT4O95628 CNN2P8-201ENST00000421872 913 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.43□□□□□ -0.26
CNOT4O95628 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CNOT4O95628 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.43□□□□□ -0.26
CNOT4O95628 AC106760.1-201ENST00000508690 800 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.43□□□□□ -0.26
CNOT4O95628 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.43□□□□□ -0.26
CNOT4O95628 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.43□□□□□ -0.26
CNOT4O95628 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.43□□□□□ -0.26
CNOT4O95628 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 AC145423.3-201ENST00000615987 467 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.43□□□□□ -0.26
CNOT4O95628 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CNOT4O95628 AC068587.10-201ENST00000641210 219 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 SSR4P1-203ENST00000599569 2260 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CNOT4O95628 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CNOT4O95628 AL138709.1-201ENST00000614840 1693 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 WASH3P-207ENST00000560956 1394 ntBASIC13.43□□□□□ -0.26
CNOT4O95628 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.43□□□□□ -0.26
CNOT4O95628 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.43□□□□□ -0.26
CNOT4O95628 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CNOT4O95628 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CNOT4O95628 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.42□□□□□ -0.26
CNOT4O95628 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CNOT4O95628 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.42□□□□□ -0.26
CNOT4O95628 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
CNOT4O95628 MROH4P-201ENST00000431302 1578 ntBASIC13.42□□□□□ -0.26
CNOT4O95628 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CNOT4O95628 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CNOT4O95628 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.42□□□□□ -0.26
CNOT4O95628 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms