Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH16O75309 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH16O75309 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH16O75309 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 SPDYE14P-201ENST00000442619 822 ntBASIC15.24■□□□□ 0.03
CDH16O75309 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CDH16O75309 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH16O75309 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH16O75309 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH16O75309 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH16O75309 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH16O75309 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH16O75309 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH16O75309 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.24■□□□□ 0.03
CDH16O75309 AL589739.1-201ENST00000607720 493 ntBASIC15.24■□□□□ 0.03
CDH16O75309 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH16O75309 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CDH16O75309 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDH16O75309 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH16O75309 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH16O75309 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CDH16O75309 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH16O75309 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH16O75309 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH16O75309 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH16O75309 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH16O75309 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDH16O75309 AL627223.1-201ENST00000416693 442 ntBASIC15.23■□□□□ 0.03
CDH16O75309 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH16O75309 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH16O75309 RBPMS2P1-201ENST00000437762 623 ntBASIC15.23■□□□□ 0.03
CDH16O75309 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH16O75309 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH16O75309 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH16O75309 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH16O75309 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH16O75309 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH16O75309 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH16O75309 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH16O75309 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH16O75309 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH16O75309 AL691403.2-201ENST00000618460 490 ntBASIC15.23■□□□□ 0.03
CDH16O75309 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 CETN4P-206ENST00000642099 2168 ntBASIC15.23■□□□□ 0.03
CDH16O75309 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH16O75309 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.23■□□□□ 0.03
CDH16O75309 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH16O75309 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH16O75309 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH16O75309 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH16O75309 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH16O75309 AL137783.1-201ENST00000623494 1896 ntBASIC15.23■□□□□ 0.03
CDH16O75309 AC105206.1-202ENST00000314927 2368 ntBASIC15.22■□□□□ 0.03
CDH16O75309 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH16O75309 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH16O75309 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDH16O75309 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH16O75309 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH16O75309 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH16O75309 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH16O75309 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms