Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.38□□□□□ -0.11
LCMT2O60294 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.38□□□□□ -0.11
LCMT2O60294 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 HILS1-202ENST00000545329 423 ntBASIC14.38□□□□□ -0.11
LCMT2O60294 SNX29P1-201ENST00000548357 1007 ntBASIC14.38□□□□□ -0.11
LCMT2O60294 KRT90P-201ENST00000549264 1064 ntBASIC14.38□□□□□ -0.11
LCMT2O60294 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.38□□□□□ -0.11
LCMT2O60294 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.38□□□□□ -0.11
LCMT2O60294 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LCMT2O60294 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LCMT2O60294 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LCMT2O60294 AC003102.2-201ENST00000589195 1469 ntBASIC14.38□□□□□ -0.11
LCMT2O60294 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LCMT2O60294 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LCMT2O60294 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.37□□□□□ -0.11
LCMT2O60294 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LCMT2O60294 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.37□□□□□ -0.11
LCMT2O60294 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 ANKRD19P-201ENST00000338192 862 ntBASIC14.37□□□□□ -0.11
LCMT2O60294 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LCMT2O60294 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.37□□□□□ -0.11
LCMT2O60294 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.37□□□□□ -0.11
LCMT2O60294 AC239800.4-201ENST00000603712 296 ntBASIC14.37□□□□□ -0.11
LCMT2O60294 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 MIR6775-201ENST00000617557 69 ntBASIC14.37□□□□□ -0.11
LCMT2O60294 AC138466.3-201ENST00000619983 221 ntBASIC14.37□□□□□ -0.11
LCMT2O60294 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.37□□□□□ -0.11
LCMT2O60294 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
LCMT2O60294 AC020910.5-201ENST00000623668 1865 ntBASIC14.37□□□□□ -0.11
LCMT2O60294 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCMT2O60294 SALL4P5-201ENST00000419001 1760 ntBASIC14.37□□□□□ -0.11
LCMT2O60294 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
LCMT2O60294 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
LCMT2O60294 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.36□□□□□ -0.11
LCMT2O60294 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 AC006001.1-201ENST00000325130 474 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 RN7SKP230-201ENST00000365642 335 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.36□□□□□ -0.11
LCMT2O60294 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 MIR1909-201ENST00000411312 80 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 ARSEP1-201ENST00000420443 635 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 RPL7P3-201ENST00000441388 714 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 AC234783.1-201ENST00000441761 496 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 CTBP2P5-201ENST00000454986 1264 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 AL391280.1-201ENST00000506969 1062 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 AP000812.2-201ENST00000538934 718 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms