Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC28A2O43868 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A2O43868 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC28A2O43868 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A2O43868 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SLC28A2O43868 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SLC28A2O43868 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SLC28A2O43868 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SLC28A2O43868 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SLC28A2O43868 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC28A2O43868 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SLC28A2O43868 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC28A2O43868 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 TMEM198B-204ENST00000484016 896 ntBASIC14.57□□□□□ -0.08
SLC28A2O43868 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 SCARNA20.5-201ENST00000516991 142 ntBASIC14.57□□□□□ -0.08
SLC28A2O43868 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC28A2O43868 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC28A2O43868 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC28A2O43868 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.57□□□□□ -0.08
SLC28A2O43868 DUX4L45-201ENST00000566406 1057 ntBASIC14.57□□□□□ -0.08
SLC28A2O43868 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC28A2O43868 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 RHOXF1P1-202ENST00000635473 501 ntBASIC14.57□□□□□ -0.08
SLC28A2O43868 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SLC28A2O43868 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SLC28A2O43868 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A2O43868 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A2O43868 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC28A2O43868 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC28A2O43868 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC28A2O43868 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SLC28A2O43868 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC28A2O43868 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC28A2O43868 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC28A2O43868 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC28A2O43868 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.56□□□□□ -0.08
SLC28A2O43868 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC28A2O43868 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC28A2O43868 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms