Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PIK3C2AO00443 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PIK3C2AO00443 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 RN7SL818P-201ENST00000485099 259 ntBASIC19.54■□□□□ 0.72
PIK3C2AO00443 AC095040.1-201ENST00000513286 675 ntBASIC19.54■□□□□ 0.72
PIK3C2AO00443 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 SIGLEC22P-201ENST00000599104 714 ntBASIC19.54■□□□□ 0.72
PIK3C2AO00443 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 RN7SL725P-201ENST00000606439 259 ntBASIC19.54■□□□□ 0.72
PIK3C2AO00443 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 AC138466.5-201ENST00000624002 808 ntBASIC19.54■□□□□ 0.72
PIK3C2AO00443 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.54■□□□□ 0.72
PIK3C2AO00443 AGGF1P1-201ENST00000509500 2073 ntBASIC19.54■□□□□ 0.72
PIK3C2AO00443 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 LAP3P2-201ENST00000454686 1454 ntBASIC19.54■□□□□ 0.72
PIK3C2AO00443 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIK3C2AO00443 AC067931.2-201ENST00000623655 2003 ntBASIC19.54■□□□□ 0.72
PIK3C2AO00443 AIRN-201ENST00000601203 4374 ntBASIC19.53■□□□□ 0.72
PIK3C2AO00443 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PIK3C2AO00443 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PIK3C2AO00443 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 AL591471.1-201ENST00000621855 229 ntBASIC19.53■□□□□ 0.72
PIK3C2AO00443 AC018442.1-201ENST00000421439 2061 ntBASIC19.53■□□□□ 0.72
PIK3C2AO00443 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIK3C2AO00443 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIK3C2AO00443 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIK3C2AO00443 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIK3C2AO00443 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIK3C2AO00443 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.53■□□□□ 0.72
PIK3C2AO00443 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PIK3C2AO00443 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.52■□□□□ 0.72
PIK3C2AO00443 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PIK3C2AO00443 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PIK3C2AO00443 STK16-203ENST00000409516 895 ntTSL 2 BASIC19.52■□□□□ 0.72
PIK3C2AO00443 AL161932.2-201ENST00000435436 679 ntBASIC19.52■□□□□ 0.72
PIK3C2AO00443 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC19.52■□□□□ 0.72
PIK3C2AO00443 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PIK3C2AO00443 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PIK3C2AO00443 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms