Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.05■□□□□ 0.16
O00370 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
O00370 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.05■□□□□ 0.16
O00370 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.05■□□□□ 0.16
O00370 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.05■□□□□ 0.16
O00370 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.05■□□□□ 0.16
O00370 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
O00370 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
O00370 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.05■□□□□ 0.16
O00370 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
O00370 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
O00370 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
O00370 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
O00370 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.05■□□□□ 0.16
O00370 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.05■□□□□ 0.16
O00370 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
O00370 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.04■□□□□ 0.16
O00370 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
O00370 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
O00370 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.04■□□□□ 0.16
O00370 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
O00370 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
O00370 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 AC097359.2-201ENST00000604992 2389 ntBASIC16.04■□□□□ 0.16
O00370 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
O00370 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
O00370 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.04■□□□□ 0.16
O00370 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.04■□□□□ 0.16
O00370 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
O00370 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.04■□□□□ 0.16
O00370 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.04■□□□□ 0.16
O00370 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.04■□□□□ 0.16
O00370 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.04■□□□□ 0.16
O00370 AC025279.2-201ENST00000569730 653 ntBASIC16.04■□□□□ 0.16
O00370 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.04■□□□□ 0.16
O00370 AL022328.1-201ENST00000610050 478 ntBASIC16.04■□□□□ 0.16
O00370 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.04■□□□□ 0.16
O00370 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
O00370 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
O00370 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
O00370 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
O00370 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
O00370 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.03■□□□□ 0.16
O00370 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.03■□□□□ 0.16
O00370 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.03■□□□□ 0.16
O00370 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.03■□□□□ 0.16
O00370 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.03■□□□□ 0.16
O00370 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.03■□□□□ 0.16
O00370 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.03■□□□□ 0.16
O00370 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
O00370 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
O00370 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.03■□□□□ 0.16
O00370 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.03■□□□□ 0.16
O00370 AC004466.1-201ENST00000599515 1080 ntBASIC16.03■□□□□ 0.16
O00370 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
O00370 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.03■□□□□ 0.16
O00370 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.03■□□□□ 0.16
O00370 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms