Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 NHS-204ENST00000615422 8860 ntTSL 5 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC8.29□□□□□ -1.08
CHKB-CPT1BH3BT56 FOSB-206ENST00000586615 3774 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 SYT2-201ENST00000367267 7614 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 SLC30A9-201ENST00000264451 6218 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AL138709.1-201ENST00000614840 1693 ntBASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AMBRA1-211ENST00000533727 4817 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 NKTR-203ENST00000442970 646 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 CCR12P-201ENST00000446203 998 ntBASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 LY6E-205ENST00000519611 635 ntTSL 3 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 MYC-209ENST00000641252 345 ntBASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 CCT7P1-201ENST00000406551 1611 ntBASIC8.28□□□□□ -1.08
CHKB-CPT1BH3BT56 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms