Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 TUBB8P8-201ENST00000458717 1058 ntBASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TBC1D3FA6NER0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 SHC1P1-201ENST00000425230 1745 ntBASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 MIR769-201ENST00000390225 118 ntBASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 AL662890.1-201ENST00000396818 632 ntBASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 AC016700.1-201ENST00000429424 312 ntBASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 AC106794.1-201ENST00000506935 792 ntBASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 MYO15B-237ENST00000642007 4893 ntBASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TBC1D3FA6NER0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms