Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.07□□□□□ -0.16
TCRBV3S1A0A5B6 HSPA8P5-201ENST00000456928 2069 ntBASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AC072061.1-201ENST00000569710 2234 ntBASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AC019294.4-201ENST00000561777 2905 ntBASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 RNA5SP416-201ENST00000516838 111 ntBASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AC092364.2-202ENST00000597012 1073 ntBASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AC003101.2-201ENST00000612557 442 ntBASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 AL033527.5-202ENST00000641632 1098 ntBASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 HLA-A-201ENST00000376802 1334 ntBASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 KRT8P35-201ENST00000483942 1338 ntBASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRBV3S1A0A5B6 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 BEND3P3-201ENST00000611030 2440 ntBASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 MTND6P24-201ENST00000440466 518 ntBASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 GAPDHP40-201ENST00000505218 1006 ntBASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 AL662844.1-201ENST00000546340 181 ntBASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms