Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 AL139094.1-201ENST00000405549 1188 ntBASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 AC004066.1-201ENST00000502488 802 ntBASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 NDUFV2P1-201ENST00000596415 907 ntBASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 LINC01101-201ENST00000622953 1884 ntBASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCDHGA9Q9Y5G4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 AC026748.1-201ENST00000624349 3251 ntBASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 UPF3AP2-201ENST00000457924 1132 ntBASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 HIST2H2BC-201ENST00000498492 580 ntBASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 AL603764.1-201ENST00000636452 321 ntBASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 AC018735.1-201ENST00000437208 1502 ntBASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGA9Q9Y5G4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms