Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.05■□□□□ 0
PCDHB1Q9Y5F3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.05■□□□□ -0
PCDHB1Q9Y5F3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 AL390755.1-201ENST00000623716 2027 ntBASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 MIR326-201ENST00000362220 95 ntBASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 GNRHR2-203ENST00000581100 1187 ntBASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 AP005019.2-201ENST00000615104 511 ntBASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms