Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 TP73-201ENST00000346387 4854 ntTSL 5 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AL354877.1-201ENST00000424412 413 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AC005077.2-201ENST00000449786 690 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 IGHJ2P-201ENST00000454480 60 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 SERPINA13P-202ENST00000478994 924 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AC005740.2-201ENST00000511085 419 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 MIR4683-201ENST00000579659 81 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AC138649.2-201ENST00000615886 705 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AL023803.2-201ENST00000620080 638 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AP000593.2-201ENST00000542775 1433 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AC018735.1-201ENST00000437208 1502 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.35■□□□□ 0.37
CTDP1Q9Y5B0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 ACTG1P17-201ENST00000558391 1119 ntBASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTDP1Q9Y5B0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.33■□□□□ 0.37
CTDP1Q9Y5B0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CTDP1Q9Y5B0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTDP1Q9Y5B0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTDP1Q9Y5B0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTDP1Q9Y5B0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms