Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 AP001282.1-201ENST00000531301 1499 ntBASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
R3HCC1Q9Y3T6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 AC055876.3-201ENST00000431496 288 ntBASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 HLA-V-204ENST00000476601 1289 ntBASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 AC138649.4-201ENST00000612222 287 ntBASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 MST1P2-201ENST00000457982 2291 ntBASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
R3HCC1Q9Y3T6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AL079307.3-201ENST00000556114 283 ntBASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AC011467.4-201ENST00000594891 528 ntBASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AL390754.1-201ENST00000619088 582 ntBASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AL691432.1-201ENST00000596308 1422 ntBASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC17.35■□□□□ 0.37
R3HCC1Q9Y3T6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms