Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NINLQ9Y2I6 RN7SL725P-201ENST00000606439 259 ntBASIC20.34■□□□□ 0.85
NINLQ9Y2I6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
NINLQ9Y2I6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NINLQ9Y2I6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC20.34■□□□□ 0.85
NINLQ9Y2I6 AC091544.8-201ENST00000619490 361 ntBASIC20.34■□□□□ 0.85
NINLQ9Y2I6 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
NINLQ9Y2I6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
NINLQ9Y2I6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NINLQ9Y2I6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NINLQ9Y2I6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.33■□□□□ 0.85
NINLQ9Y2I6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.33■□□□□ 0.85
NINLQ9Y2I6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NINLQ9Y2I6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC20.33■□□□□ 0.85
NINLQ9Y2I6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 AC104073.2-201ENST00000453737 312 ntBASIC20.33■□□□□ 0.84
NINLQ9Y2I6 RCC2P8-201ENST00000502779 1035 ntBASIC20.33■□□□□ 0.84
NINLQ9Y2I6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 AC024681.1-201ENST00000521917 487 ntBASIC20.33■□□□□ 0.84
NINLQ9Y2I6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC20.33■□□□□ 0.84
NINLQ9Y2I6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AL161670.2-201ENST00000557650 1227 ntBASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AC018635.2-201ENST00000608625 364 ntBASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AC097724.1-201ENST00000609581 426 ntBASIC20.32■□□□□ 0.84
NINLQ9Y2I6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NINLQ9Y2I6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NINLQ9Y2I6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms