Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 KRT17P4-201ENST00000429445 819 ntBASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 AC244197.1-201ENST00000456494 951 ntBASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 AP000322.3-201ENST00000608665 388 ntBASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ZC3H4Q9UPT8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 AL360270.3-201ENST00000609118 1348 ntBASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 REXO1L5P-201ENST00000622260 2098 ntBASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 MARK2P16-201ENST00000605714 1723 ntBASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZC3H4Q9UPT8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 AL035414.1-201ENST00000451327 857 ntBASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 DPY19L2P5-201ENST00000456300 331 ntBASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZC3H4Q9UPT8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 CYP4F23P-201ENST00000593402 1579 ntBASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 RPL35P9-201ENST00000446059 350 ntBASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 FTLP5-201ENST00000586853 534 ntBASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 AC011471.3-201ENST00000623576 402 ntBASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ZC3H4Q9UPT8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ZC3H4Q9UPT8 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms