Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 ENPP7P14-201ENST00000621765 1040 ntBASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 AC007191.1-201ENST00000623179 2995 ntBASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 AC084364.1-201ENST00000551967 1556 ntBASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC6Q9UBN7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 CALR4P-201ENST00000431943 946 ntBASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC6Q9UBN7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HDAC6Q9UBN7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HDAC6Q9UBN7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 AC005089.1-201ENST00000619486 2241 ntBASIC17■□□□□ 0.31
HDAC6Q9UBN7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HDAC6Q9UBN7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17■□□□□ 0.31
HDAC6Q9UBN7 AL645937.2-201ENST00000396808 931 ntBASIC17■□□□□ 0.31
HDAC6Q9UBN7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC6Q9UBN7 KRTAP10-13P-201ENST00000412914 571 ntBASIC17■□□□□ 0.31
HDAC6Q9UBN7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HDAC6Q9UBN7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms