Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 AC009779.1-201ENST00000551138 283 ntBASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 AC008805.1-201ENST00000590892 364 ntBASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 AL353770.1-201ENST00000614915 403 ntBASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 AL353726.2-201ENST00000623259 884 ntBASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 AC003102.2-201ENST00000589195 1469 ntBASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.58■□□□□ 0.08
DNMT3BQ9UBC3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 ISCA2P1-201ENST00000425548 448 ntBASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 PDIA3P2-201ENST00000428073 158 ntBASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AC234782.1-201ENST00000451950 919 ntBASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 RCC2P8-201ENST00000502779 1035 ntBASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AP000346.4-201ENST00000614827 381 ntBASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 Z98259.2-201ENST00000641583 609 ntBASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
DNMT3BQ9UBC3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.56■□□□□ 0.08
DNMT3BQ9UBC3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNMT3BQ9UBC3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DNMT3BQ9UBC3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
DNMT3BQ9UBC3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNMT3BQ9UBC3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNMT3BQ9UBC3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DNMT3BQ9UBC3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.56■□□□□ 0.08
DNMT3BQ9UBC3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNMT3BQ9UBC3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms