Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 C18orf15-201ENST00000623680 2534 ntBASIC13.83□□□□□ -0.2
LRFN1Q9P244 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.83□□□□□ -0.2
LRFN1Q9P244 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 MESTP3-201ENST00000503460 968 ntBASIC13.83□□□□□ -0.2
LRFN1Q9P244 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 AP001258.2-201ENST00000529891 490 ntBASIC13.83□□□□□ -0.2
LRFN1Q9P244 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 AC073413.1-201ENST00000603927 732 ntBASIC13.83□□□□□ -0.2
LRFN1Q9P244 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 TMBIM7P-203ENST00000641617 1718 ntBASIC13.83□□□□□ -0.2
LRFN1Q9P244 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRFN1Q9P244 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LRFN1Q9P244 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 SSR4P1-203ENST00000599569 2260 ntBASIC13.82□□□□□ -0.2
LRFN1Q9P244 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 GPAA1P2-201ENST00000417923 928 ntBASIC13.82□□□□□ -0.2
LRFN1Q9P244 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 KRT8P13-201ENST00000463294 1010 ntBASIC13.82□□□□□ -0.2
LRFN1Q9P244 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 MIR3615-201ENST00000581999 87 ntBASIC13.82□□□□□ -0.2
LRFN1Q9P244 AL096828.3-201ENST00000615354 462 ntBASIC13.82□□□□□ -0.2
LRFN1Q9P244 AL008638.5-201ENST00000623814 1298 ntBASIC13.82□□□□□ -0.2
LRFN1Q9P244 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 FKBP4P6-201ENST00000457486 1332 ntBASIC13.82□□□□□ -0.2
LRFN1Q9P244 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRFN1Q9P244 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.82□□□□□ -0.2
LRFN1Q9P244 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRFN1Q9P244 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.81□□□□□ -0.2
LRFN1Q9P244 PCDHA3-202ENST00000532566 4594 ntBASIC13.81□□□□□ -0.2
LRFN1Q9P244 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms