Protein–RNA interactions for Protein: Q9GZP0

PDGFD, Platelet-derived growth factor D, humanhuman

Predicted RBP Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFDQ9GZP0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFDQ9GZP0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDGFDQ9GZP0 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDGFDQ9GZP0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFDQ9GZP0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDGFDQ9GZP0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFDQ9GZP0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 AC012508.2-201ENST00000567613 1472 ntBASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 IFNWP2-201ENST00000431203 580 ntBASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 KRT8P30-201ENST00000432100 650 ntBASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 MAGEA7P-201ENST00000436482 942 ntBASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 SEPHS2P1-201ENST00000511618 1162 ntBASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 HNRNPA1P16-201ENST00000575692 955 ntBASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFDQ9GZP0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFDQ9GZP0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 CASP2-203ENST00000392925 616 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 AL080243.1-201ENST00000423293 1060 ntBASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 AC008026.2-201ENST00000495438 348 ntBASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 NAA40-205ENST00000539656 577 ntTSL 4 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 RN7SL602P-201ENST00000578326 324 ntBASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 RN7SL718P-201ENST00000581254 303 ntBASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 BRD7P5-201ENST00000299197 1822 ntBASIC18.33■□□□□ 0.52
PDGFDQ9GZP0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PDGFDQ9GZP0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms