Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 AC007191.1-201ENST00000623179 2995 ntBASIC10.57□□□□□ -0.72
UPK3BQ9BT76 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 AC134312.5-201ENST00000568031 1313 ntBASIC10.57□□□□□ -0.72
UPK3BQ9BT76 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AC073347.1-201ENST00000421633 2643 ntBASIC10.56□□□□□ -0.72
UPK3BQ9BT76 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AP005117.1-202ENST00000581724 1908 ntBASIC10.56□□□□□ -0.72
UPK3BQ9BT76 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AL023775.1-201ENST00000454907 1746 ntBASIC10.56□□□□□ -0.72
UPK3BQ9BT76 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AC093433.1-201ENST00000458048 571 ntBASIC10.56□□□□□ -0.72
UPK3BQ9BT76 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 KSR1-207ENST00000578981 748 ntTSL 4 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AL512343.1-201ENST00000605837 169 ntBASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC10.56□□□□□ -0.72
UPK3BQ9BT76 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms