Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC135586.1-201ENST00000539323 574 ntBASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 TIMM17BP1-201ENST00000545713 516 ntBASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 AC104794.3-201ENST00000566840 1248 ntBASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 SRD5A3P1-201ENST00000603021 949 ntBASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 AC138649.4-201ENST00000612222 287 ntBASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 BX640514.1-201ENST00000583223 1918 ntBASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM56Q9BRZ2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 AL035633.1-201ENST00000406139 838 ntBASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 GAPDHP40-201ENST00000505218 1006 ntBASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 AL360270.3-201ENST00000609118 1348 ntBASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM56Q9BRZ2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 AC007787.1-201ENST00000588095 1583 ntBASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 MEIS3P1-201ENST00000495167 958 ntBASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM56Q9BRZ2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms