Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PCDHA1-201ENST00000378133 2726 ntBASIC19.25■□□□□ 0.67
ABCA3Q99758 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCA3Q99758 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
ABCA3Q99758 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ABCA3Q99758 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.25■□□□□ 0.67
ABCA3Q99758 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ABCA3Q99758 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC19.25■□□□□ 0.67
ABCA3Q99758 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ABCA3Q99758 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC19.25■□□□□ 0.67
ABCA3Q99758 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC19.25■□□□□ 0.67
ABCA3Q99758 KNOP1P1-201ENST00000542108 989 ntBASIC19.25■□□□□ 0.67
ABCA3Q99758 AL021707.6-201ENST00000609212 491 ntBASIC19.25■□□□□ 0.67
ABCA3Q99758 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCA3Q99758 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCA3Q99758 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ABCA3Q99758 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ABCA3Q99758 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ABCA3Q99758 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.24■□□□□ 0.67
ABCA3Q99758 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ABCA3Q99758 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCA3Q99758 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 GOLGA6L16P-201ENST00000441780 1299 ntBASIC19.24■□□□□ 0.67
ABCA3Q99758 GRPEL2P1-201ENST00000453145 339 ntBASIC19.24■□□□□ 0.67
ABCA3Q99758 RN7SL288P-201ENST00000490496 291 ntBASIC19.24■□□□□ 0.67
ABCA3Q99758 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCA3Q99758 AC140658.4-201ENST00000561990 352 ntBASIC19.24■□□□□ 0.67
ABCA3Q99758 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC19.24■□□□□ 0.67
ABCA3Q99758 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCA3Q99758 HPX-213ENST00000615166 826 ntTSL 5 BASIC19.24■□□□□ 0.67
ABCA3Q99758 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC19.24■□□□□ 0.67
ABCA3Q99758 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCA3Q99758 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCA3Q99758 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCA3Q99758 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCA3Q99758 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ABCA3Q99758 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC19.23■□□□□ 0.67
ABCA3Q99758 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 AC008026.2-201ENST00000495438 348 ntBASIC19.23■□□□□ 0.67
ABCA3Q99758 AC005740.1-201ENST00000515639 522 ntBASIC19.23■□□□□ 0.67
ABCA3Q99758 AC087203.1-201ENST00000532111 1181 ntBASIC19.23■□□□□ 0.67
ABCA3Q99758 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC19.23■□□□□ 0.67
ABCA3Q99758 DLK1-205ENST00000556051 469 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCA3Q99758 GGNBP1-204ENST00000613113 887 ntBASIC19.23■□□□□ 0.67
ABCA3Q99758 AL591424.3-201ENST00000614278 872 ntBASIC19.23■□□□□ 0.67
ABCA3Q99758 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ABCA3Q99758 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ABCA3Q99758 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ABCA3Q99758 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ABCA3Q99758 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC19.23■□□□□ 0.67
ABCA3Q99758 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ABCA3Q99758 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ABCA3Q99758 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ABCA3Q99758 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCA3Q99758 CICP23-201ENST00000605013 2741 ntBASIC19.23■□□□□ 0.67
ABCA3Q99758 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
ABCA3Q99758 KRT8P43-201ENST00000406052 1458 ntBASIC19.23■□□□□ 0.67
ABCA3Q99758 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC19.23■□□□□ 0.67
ABCA3Q99758 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ABCA3Q99758 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCA3Q99758 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCA3Q99758 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCA3Q99758 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCA3Q99758 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.22■□□□□ 0.67
ABCA3Q99758 OR10N1P-201ENST00000392758 869 ntBASIC19.22■□□□□ 0.67
ABCA3Q99758 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.22■□□□□ 0.67
ABCA3Q99758 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ABCA3Q99758 HINT1-205ENST00000508488 703 ntTSL 2 BASIC19.22■□□□□ 0.67
ABCA3Q99758 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCA3Q99758 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCA3Q99758 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC19.22■□□□□ 0.67
ABCA3Q99758 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC19.22■□□□□ 0.67
ABCA3Q99758 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCA3Q99758 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC19.22■□□□□ 0.67
ABCA3Q99758 FKBP4P8-201ENST00000610931 1369 ntBASIC19.22■□□□□ 0.67
ABCA3Q99758 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ABCA3Q99758 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC19.22■□□□□ 0.67
ABCA3Q99758 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ABCA3Q99758 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.22■□□□□ 0.67
ABCA3Q99758 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms