Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 GPR53P-205ENST00000457298 1084 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 ACA64.2-201ENST00000459014 129 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 AL391280.1-201ENST00000506969 1062 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 AP000812.2-201ENST00000538934 718 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 HILS1-202ENST00000545329 423 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 AC106820.3-201ENST00000561653 397 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 RHOXF1P1-202ENST00000635473 501 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 AC006453.4-201ENST00000636949 1252 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 MYO15B-237ENST00000642007 4893 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AL354989.2-201ENST00000435838 1540 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AC106881.1-201ENST00000605849 3329 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AC006001.1-201ENST00000325130 474 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 CD8B2-202ENST00000417670 633 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 FAM8A4P-201ENST00000435433 1213 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 KLF2P4-201ENST00000451959 1225 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 CTBP2P5-201ENST00000454986 1264 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 SNX29P1-201ENST00000548357 1007 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AC239800.4-201ENST00000603712 296 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AL390755.1-201ENST00000623716 2027 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GAFA1Q96PS6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.48□□□□□ -0.41
GAFA1Q96PS6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.47□□□□□ -0.41
GAFA1Q96PS6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms