Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL121912.1-201ENST00000603683 238 ntBASIC11.48□□□□□ -0.57
AP1S3Q96PC3 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 FAM215A-202ENST00000632077 792 ntBASIC11.48□□□□□ -0.57
AP1S3Q96PC3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
AP1S3Q96PC3 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 RHOQP3-201ENST00000437982 621 ntBASIC11.47□□□□□ -0.57
AP1S3Q96PC3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 HCG4B-203ENST00000450128 991 ntBASIC11.47□□□□□ -0.57
AP1S3Q96PC3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 MIR4313-201ENST00000580760 101 ntBASIC11.47□□□□□ -0.57
AP1S3Q96PC3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
AP1S3Q96PC3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms