Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 RPS2P32-201ENST00000439199 892 ntBASIC15.5■□□□□ 0.07
RPRD1AQ96P16 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 MESTP3-201ENST00000503460 968 ntBASIC15.5■□□□□ 0.07
RPRD1AQ96P16 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.5■□□□□ 0.07
RPRD1AQ96P16 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 FKBP4P6-201ENST00000457486 1332 ntBASIC15.49■□□□□ 0.07
RPRD1AQ96P16 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 AL391280.1-201ENST00000506969 1062 ntBASIC15.49■□□□□ 0.07
RPRD1AQ96P16 COX5BP1-201ENST00000507622 393 ntBASIC15.49■□□□□ 0.07
RPRD1AQ96P16 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPRD1AQ96P16 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms